Protein damage susceptibility (7 Å)

Protein damage susceptibility (6 Å)

Enzymes      Proteins


Fichtner M, Schuster S & Stark H (2020) Determination of scoring functions for protein damage susceptibility. Biosystems 187: 104035. DOI:10.1016/J.BIOSYSTEMS.2019.104035
Fichtner M, Schuster S & Stark H (2019) Data for: Determination of scoring functions for protein damage susceptibility. Mendeley Data, Licence: CC BY 4.0. DOI:10.17632/b2cbxsnvcx.1
Fichtner M, Schuster S & Stark H (2021) Influence of spatial structure on protein damage susceptibility: a bioinformatics approach. Sci Rep 11, 4938. DOI:10.1038/s41598-021-84061-8
Fichtner M, Schuster S & Stark H (2021) Data for: Influence of spatial structure on protein damage susceptibility—A bioinformatics approach. Mendeley Data, Licence: CC BY 4.0. DOI:10.17632/jkmbpfgp4k.1


Low values = less susceptible / High values = more susceptible
Black line = randomly assembled protein (value = 5)
Distribution of all peptides/proteins
Distribution of selected peptides/proteins
Distribution of hidden values
(red)
(blue)
(shortened blue bars)


 
Archaea
 
All
Core
Surface
Only sidechain (-backbone)
Only backbone (-sidechain)
Thermococcus
Sulfolobus


 
Bacteria
 
All
Core
Surface
Only sidechain (-backbone)
Only backbone (-sidechain)
Escherichia
Bacillus
Streptomyces


 
Fungi
 
All
Core
Surface
Only sidechain (-backbone)
Only backbone (-sidechain)
Neurospora
Saccharomyces


 
Plantae
 
All
Core
Surface
Only sidechain (-backbone)
Only backbone (-sidechain)
Arabidopsis
Physcomitrella


 
Protostomia
 
All
Core
Surface
Only sidechain (-backbone)
Only backbone (-sidechain)
Drosophila
Caenorhabditis


 
Deuterostomia
 
All
Core
Surface
Only sidechain (-backbone)
Only backbone (-sidechain)
Xenopus
Gallus gallus
Danio rerio
Mus musculus
Rattus norvegicus
Homo sapiens