Protein damage susceptibility (6 Å)

Protein damage susceptibility (7 Å)

Proteins      Organisms


Fichtner M, Schuster S & Stark H (2020) Determination of scoring functions for protein damage susceptibility. Biosystems 187: 104035. DOI:10.1016/J.BIOSYSTEMS.2019.104035

Fichtner M, Schuster S & Stark H (2019) Data for: Determination of scoring functions for protein damage susceptibility. Mendeley Data, Licence: CC BY 4.0. DOI:10.17632/b2cbxsnvcx.1

Fichtner M, Schuster S & Stark H (2021) Influence of spatial structure on protein damage susceptibility: a bioinformatics approach. Sci Rep 11, 4938. DOI:10.1038/s41598-021-84061-8

Fichtner M, Schuster S & Stark H (2021) Data for: Influence of spatial structure on protein damage susceptibility—A bioinformatics approach. Mendeley Data, Licence: CC BY 4.0. DOI:10.17632/jkmbpfgp4k.1


Low values = less susceptible / High values = more susceptible
Black line = randomly assembled protein (value = 5)


Distribution of all peptides/proteins
Distribution of selected peptides/proteins
Distribution of hidden values
(red)
(blue)
(shortened blue bars)


 
Enzymes EC:01-02
 
All
Core
Surface
Only sidechain (-backbone)
Only backbone (-sidechain)
EC:Oxidoreduktasen
EC:Transferasen


 
Hydrolases EC:03
 
All
Core
Surface
Only sidechain (-backbone)
Only backbone (-sidechain)
EC:Hydrolasen
EC:Hydrolasen 01
EC:Hydrolasen 02
EC:Hydrolasen 03
EC:Hydrolasen 04
EC:Hydrolasen 05
EC:Hydrolasen 06
EC:Hydrolasen 07
EC:Hydrolasen 08
EC:Hydrolasen 09
EC:Hydrolasen 10
EC:Hydrolasen 11
EC:Hydrolasen 12
EC:Hydrolasen 13


 
Lyases EC:04
 
All
Core
Surface
Only sidechain (-backbone)
Only backbone (-sidechain)
EC:Lyasen
EC:Lyasen 01
EC:Lyasen 02
EC:Lyasen 03
EC:Lyasen 04
EC:Lyasen 05
EC:Lyasen 06


 
Isomerases EC:05
 
All
Core
Surface
Only sidechain (-backbone)
Only backbone (-sidechain)
EC:Isomerasen
EC:Isomerasen 01
EC:Isomerasen 02
EC:Isomerasen 03
EC:Isomerasen 04
EC:Isomerasen 05


 
Enzymes EC:06-07
 
All
Core
Surface
Only sidechain (-backbone)
Only backbone (-sidechain)
EC:Ligasen
EC:Translokasen